Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
MMP2P08253 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
MMP2P08253 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
MMP2P08253 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
MMP2P08253 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP2P08253 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP2P08253 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP2P08253 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP2P08253 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.58■□□□□ 0.24
MMP2P08253 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.58■□□□□ 0.24
MMP2P08253 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
MMP2P08253 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
MMP2P08253 TIMM8BP1-201ENST00000452384 211 ntBASIC16.58■□□□□ 0.24
MMP2P08253 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP2P08253 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
MMP2P08253 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
MMP2P08253 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
MMP2P08253 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.58■□□□□ 0.24
MMP2P08253 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.58■□□□□ 0.24
MMP2P08253 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.58■□□□□ 0.24
MMP2P08253 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.58■□□□□ 0.24
MMP2P08253 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.58■□□□□ 0.24
MMP2P08253 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.58■□□□□ 0.24
MMP2P08253 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.58■□□□□ 0.24
MMP2P08253 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
MMP2P08253 AC008267.7-201ENST00000624570 1194 ntBASIC16.58■□□□□ 0.24
MMP2P08253 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.58■□□□□ 0.24
MMP2P08253 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.58■□□□□ 0.24
MMP2P08253 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
MMP2P08253 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP2P08253 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP2P08253 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP2P08253 AL589702.1-201ENST00000641229 1509 ntBASIC16.58■□□□□ 0.24
MMP2P08253 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP2P08253 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP2P08253 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.58■□□□□ 0.24
MMP2P08253 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP2P08253 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP2P08253 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
MMP2P08253 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP2P08253 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.58■□□□□ 0.24
MMP2P08253 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
MMP2P08253 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.58■□□□□ 0.24
MMP2P08253 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
MMP2P08253 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.58■□□□□ 0.24
MMP2P08253 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
MMP2P08253 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.57■□□□□ 0.24
MMP2P08253 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP2P08253 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP2P08253 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.57■□□□□ 0.24
MMP2P08253 U82695.1-201ENST00000635752 1889 ntBASIC16.57■□□□□ 0.24
MMP2P08253 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP2P08253 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
MMP2P08253 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.57■□□□□ 0.24
MMP2P08253 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MMP2P08253 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP2P08253 MIR346-201ENST00000362234 95 ntBASIC16.57■□□□□ 0.24
MMP2P08253 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
MMP2P08253 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
MMP2P08253 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP2P08253 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.57■□□□□ 0.24
MMP2P08253 MIR3687-2-201ENST00000577708 61 ntBASIC16.57■□□□□ 0.24
MMP2P08253 AC022145.2-201ENST00000598203 171 ntBASIC16.57■□□□□ 0.24
MMP2P08253 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.57■□□□□ 0.24
MMP2P08253 MIR3687-1-201ENST00000614492 61 ntBASIC16.57■□□□□ 0.24
MMP2P08253 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MMP2P08253 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
MMP2P08253 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP2P08253 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
MMP2P08253 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
MMP2P08253 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.57■□□□□ 0.24
MMP2P08253 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.56■□□□□ 0.24
MMP2P08253 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.56■□□□□ 0.24
MMP2P08253 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.56■□□□□ 0.24
MMP2P08253 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
MMP2P08253 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.56■□□□□ 0.24
MMP2P08253 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.56■□□□□ 0.24
MMP2P08253 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
MMP2P08253 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
MMP2P08253 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
MMP2P08253 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.56■□□□□ 0.24
MMP2P08253 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
MMP2P08253 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
MMP2P08253 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
MMP2P08253 AC142381.1-201ENST00000426099 345 ntBASIC16.56■□□□□ 0.24
MMP2P08253 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.56■□□□□ 0.24
MMP2P08253 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.56■□□□□ 0.24
MMP2P08253 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
MMP2P08253 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.56■□□□□ 0.24
MMP2P08253 AC105233.2-201ENST00000523697 349 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms