Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.77□□□□□ -0.21
CTSDP07339 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.77□□□□□ -0.21
CTSDP07339 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CTSDP07339 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CTSDP07339 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.77□□□□□ -0.21
CTSDP07339 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.77□□□□□ -0.21
CTSDP07339 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CTSDP07339 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.76□□□□□ -0.21
CTSDP07339 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CTSDP07339 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CTSDP07339 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CTSDP07339 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CTSDP07339 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CTSDP07339 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.76□□□□□ -0.21
CTSDP07339 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CTSDP07339 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.76□□□□□ -0.21
CTSDP07339 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CTSDP07339 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.76□□□□□ -0.21
CTSDP07339 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.76□□□□□ -0.21
CTSDP07339 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.76□□□□□ -0.21
CTSDP07339 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 AL671277.2-201ENST00000458060 996 ntBASIC13.76□□□□□ -0.21
CTSDP07339 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
CTSDP07339 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.76□□□□□ -0.21
CTSDP07339 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CTSDP07339 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.76□□□□□ -0.21
CTSDP07339 AC010654.1-201ENST00000615722 808 ntBASIC13.76□□□□□ -0.21
CTSDP07339 AC073592.4-201ENST00000623827 446 ntBASIC13.76□□□□□ -0.21
CTSDP07339 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.76□□□□□ -0.21
CTSDP07339 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.76□□□□□ -0.21
CTSDP07339 PPT1-215ENST00000641471 2368 ntBASIC13.76□□□□□ -0.21
CTSDP07339 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.76□□□□□ -0.21
CTSDP07339 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.76□□□□□ -0.21
CTSDP07339 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CTSDP07339 AC016027.1-202ENST00000607927 1699 ntBASIC13.75□□□□□ -0.21
CTSDP07339 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CTSDP07339 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.75□□□□□ -0.21
CTSDP07339 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.75□□□□□ -0.21
CTSDP07339 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.75□□□□□ -0.21
CTSDP07339 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CTSDP07339 PRAL-201ENST00000624952 3286 ntBASIC13.75□□□□□ -0.21
CTSDP07339 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.75□□□□□ -0.21
CTSDP07339 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CTSDP07339 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.75□□□□□ -0.21
CTSDP07339 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CTSDP07339 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.75□□□□□ -0.21
CTSDP07339 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.75□□□□□ -0.21
CTSDP07339 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.75□□□□□ -0.21
CTSDP07339 NTF6B-201ENST00000591913 560 ntBASIC13.75□□□□□ -0.21
CTSDP07339 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.75□□□□□ -0.21
CTSDP07339 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CTSDP07339 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.75□□□□□ -0.21
CTSDP07339 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.75□□□□□ -0.21
CTSDP07339 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.75□□□□□ -0.21
CTSDP07339 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CTSDP07339 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.75□□□□□ -0.21
CTSDP07339 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.75□□□□□ -0.21
CTSDP07339 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CTSDP07339 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.75□□□□□ -0.21
CTSDP07339 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.75□□□□□ -0.21
CTSDP07339 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CTSDP07339 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms