Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 AC092850.2-201ENST00000623821 2697 ntBASIC16.06■□□□□ 0.16
KRT6AP02538 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT6AP02538 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
KRT6AP02538 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
KRT6AP02538 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
KRT6AP02538 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT6AP02538 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT6AP02538 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT6AP02538 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 KRT18P67-201ENST00000432816 1264 ntBASIC16.06■□□□□ 0.16
KRT6AP02538 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.06■□□□□ 0.16
KRT6AP02538 EMBP1-201ENST00000458200 901 ntBASIC16.06■□□□□ 0.16
KRT6AP02538 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT6AP02538 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.06■□□□□ 0.16
KRT6AP02538 AC020765.3-201ENST00000613051 740 ntBASIC16.06■□□□□ 0.16
KRT6AP02538 TP73-AS1-207ENST00000624167 988 ntBASIC16.06■□□□□ 0.16
KRT6AP02538 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT6AP02538 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT6AP02538 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT6AP02538 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
KRT6AP02538 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT6AP02538 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT6AP02538 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
KRT6AP02538 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT6AP02538 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.05■□□□□ 0.16
KRT6AP02538 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.05■□□□□ 0.16
KRT6AP02538 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
KRT6AP02538 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.05■□□□□ 0.16
KRT6AP02538 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.05■□□□□ 0.16
KRT6AP02538 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT6AP02538 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
KRT6AP02538 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
KRT6AP02538 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
KRT6AP02538 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT6AP02538 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
KRT6AP02538 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
KRT6AP02538 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT6AP02538 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
KRT6AP02538 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
KRT6AP02538 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT6AP02538 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
KRT6AP02538 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.04■□□□□ 0.16
KRT6AP02538 AP002414.3-201ENST00000589352 1468 ntBASIC16.04■□□□□ 0.16
KRT6AP02538 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.04■□□□□ 0.16
KRT6AP02538 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
KRT6AP02538 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT6AP02538 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.04■□□□□ 0.16
KRT6AP02538 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
KRT6AP02538 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT6AP02538 HNRNPDP1-201ENST00000439535 754 ntBASIC16.04■□□□□ 0.16
KRT6AP02538 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.04■□□□□ 0.16
KRT6AP02538 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
KRT6AP02538 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.04■□□□□ 0.16
KRT6AP02538 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT6AP02538 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT6AP02538 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
KRT6AP02538 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT6AP02538 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
KRT6AP02538 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT6AP02538 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms