Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AL049840.4-201ENST00000602422 811 ntBASIC21.49■■□□□ 1.03
LTN1O94822 INTS4P2-202ENST00000614726 2019 ntBASIC21.49■■□□□ 1.03
LTN1O94822 AC011447.5-201ENST00000616168 564 ntBASIC21.49■■□□□ 1.03
LTN1O94822 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
LTN1O94822 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
LTN1O94822 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LTN1O94822 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.49■■□□□ 1.03
LTN1O94822 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
LTN1O94822 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
LTN1O94822 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LTN1O94822 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC21.49■■□□□ 1.03
LTN1O94822 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
LTN1O94822 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC21.49■■□□□ 1.03
LTN1O94822 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.49■■□□□ 1.03
LTN1O94822 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.49■■□□□ 1.03
LTN1O94822 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
LTN1O94822 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.49■■□□□ 1.03
LTN1O94822 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
LTN1O94822 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LTN1O94822 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LTN1O94822 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC21.49■■□□□ 1.03
LTN1O94822 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LTN1O94822 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.48■■□□□ 1.03
LTN1O94822 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC21.48■■□□□ 1.03
LTN1O94822 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC21.48■■□□□ 1.03
LTN1O94822 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LTN1O94822 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
LTN1O94822 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.48■■□□□ 1.03
LTN1O94822 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LTN1O94822 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LTN1O94822 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LTN1O94822 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC21.48■■□□□ 1.03
LTN1O94822 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.48■■□□□ 1.03
LTN1O94822 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
LTN1O94822 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC21.48■■□□□ 1.03
LTN1O94822 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LTN1O94822 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LTN1O94822 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LTN1O94822 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC21.48■■□□□ 1.03
LTN1O94822 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.48■■□□□ 1.03
LTN1O94822 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LTN1O94822 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
LTN1O94822 GNRHR2-203ENST00000581100 1187 ntBASIC21.48■■□□□ 1.03
LTN1O94822 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC21.48■■□□□ 1.03
LTN1O94822 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LTN1O94822 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
LTN1O94822 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.48■■□□□ 1.03
LTN1O94822 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC21.48■■□□□ 1.03
LTN1O94822 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.48■■□□□ 1.03
LTN1O94822 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LTN1O94822 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LTN1O94822 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC21.47■■□□□ 1.03
LTN1O94822 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LTN1O94822 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
LTN1O94822 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC21.47■■□□□ 1.03
LTN1O94822 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LTN1O94822 LINC01144-201ENST00000626198 1710 ntBASIC21.47■■□□□ 1.03
LTN1O94822 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LTN1O94822 NSL1-201ENST00000366976 722 ntTSL 2 BASIC21.47■■□□□ 1.03
LTN1O94822 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
LTN1O94822 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LTN1O94822 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LTN1O94822 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LTN1O94822 AC104989.1-201ENST00000519711 778 ntBASIC21.47■■□□□ 1.03
LTN1O94822 HNRNPUP1-201ENST00000554987 333 ntBASIC21.47■■□□□ 1.03
LTN1O94822 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LTN1O94822 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC21.47■■□□□ 1.03
LTN1O94822 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LTN1O94822 PDIA3P1-201ENST00000471856 1510 ntBASIC21.47■■□□□ 1.03
LTN1O94822 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
LTN1O94822 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
LTN1O94822 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LTN1O94822 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LTN1O94822 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
LTN1O94822 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LTN1O94822 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
LTN1O94822 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC21.47■■□□□ 1.03
LTN1O94822 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.47■■□□□ 1.03
LTN1O94822 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
LTN1O94822 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LTN1O94822 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LTN1O94822 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
LTN1O94822 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
LTN1O94822 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
LTN1O94822 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LTN1O94822 AC074338.1-201ENST00000416825 156 ntBASIC21.46■■□□□ 1.03
LTN1O94822 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC21.46■■□□□ 1.03
LTN1O94822 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
LTN1O94822 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC21.46■■□□□ 1.03
LTN1O94822 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LTN1O94822 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC21.46■■□□□ 1.03
LTN1O94822 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC21.46■■□□□ 1.03
LTN1O94822 AC092552.1-201ENST00000547243 906 ntBASIC21.46■■□□□ 1.03
LTN1O94822 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC21.46■■□□□ 1.03
LTN1O94822 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LTN1O94822 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LTN1O94822 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC21.46■■□□□ 1.03
LTN1O94822 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LTN1O94822 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LTN1O94822 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms