Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
GPC4O75487 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.62■□□□□ 0.25
GPC4O75487 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
GPC4O75487 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
GPC4O75487 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.62■□□□□ 0.25
GPC4O75487 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GPC4O75487 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
GPC4O75487 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.62■□□□□ 0.25
GPC4O75487 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.62■□□□□ 0.25
GPC4O75487 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 BX640515.1-201ENST00000617215 977 ntBASIC16.62■□□□□ 0.25
GPC4O75487 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 AC129492.6-201ENST00000611383 1305 ntBASIC16.62■□□□□ 0.25
GPC4O75487 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.62■□□□□ 0.25
GPC4O75487 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.62■□□□□ 0.25
GPC4O75487 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.62■□□□□ 0.25
GPC4O75487 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
GPC4O75487 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
GPC4O75487 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GPC4O75487 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.62■□□□□ 0.25
GPC4O75487 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.61■□□□□ 0.25
GPC4O75487 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.61■□□□□ 0.25
GPC4O75487 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.61■□□□□ 0.25
GPC4O75487 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.61■□□□□ 0.25
GPC4O75487 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.61■□□□□ 0.25
GPC4O75487 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
GPC4O75487 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
GPC4O75487 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.61■□□□□ 0.25
GPC4O75487 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.61■□□□□ 0.25
GPC4O75487 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
GPC4O75487 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.61■□□□□ 0.25
GPC4O75487 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
GPC4O75487 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
GPC4O75487 Z83851.2-201ENST00000609564 659 ntBASIC16.61■□□□□ 0.25
GPC4O75487 AC010654.1-201ENST00000615722 808 ntBASIC16.61■□□□□ 0.25
GPC4O75487 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
GPC4O75487 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
GPC4O75487 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
GPC4O75487 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.61■□□□□ 0.25
GPC4O75487 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.61■□□□□ 0.25
GPC4O75487 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.61■□□□□ 0.25
GPC4O75487 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.61■□□□□ 0.25
GPC4O75487 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.61■□□□□ 0.25
GPC4O75487 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.61■□□□□ 0.25
GPC4O75487 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GPC4O75487 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GPC4O75487 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GPC4O75487 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC4O75487 AL513523.2-202ENST00000427283 2040 ntBASIC16.6■□□□□ 0.25
GPC4O75487 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GPC4O75487 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC4O75487 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC4O75487 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.6■□□□□ 0.25
GPC4O75487 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC4O75487 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC4O75487 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC4O75487 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms