Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.18■□□□□ 0.66
CTNND1O60716 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTNND1O60716 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTNND1O60716 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.18■□□□□ 0.66
CTNND1O60716 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CTNND1O60716 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CTNND1O60716 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.17■□□□□ 0.66
CTNND1O60716 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CTNND1O60716 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNND1O60716 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTNND1O60716 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
CTNND1O60716 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNND1O60716 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNND1O60716 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 U91328.1-201ENST00000437528 223 ntBASIC19.17■□□□□ 0.66
CTNND1O60716 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNND1O60716 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNND1O60716 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.17■□□□□ 0.66
CTNND1O60716 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.17■□□□□ 0.66
CTNND1O60716 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.17■□□□□ 0.66
CTNND1O60716 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.17■□□□□ 0.66
CTNND1O60716 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CTNND1O60716 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.17■□□□□ 0.66
CTNND1O60716 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.17■□□□□ 0.66
CTNND1O60716 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.17■□□□□ 0.66
CTNND1O60716 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTNND1O60716 AL031731.1-201ENST00000642131 2094 ntBASIC19.16■□□□□ 0.66
CTNND1O60716 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CTNND1O60716 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CTNND1O60716 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CTNND1O60716 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNND1O60716 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNND1O60716 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.16■□□□□ 0.66
CTNND1O60716 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CTNND1O60716 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNND1O60716 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.16■□□□□ 0.66
CTNND1O60716 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTNND1O60716 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNND1O60716 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTNND1O60716 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.16■□□□□ 0.66
CTNND1O60716 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNND1O60716 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.16■□□□□ 0.66
CTNND1O60716 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNND1O60716 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.16■□□□□ 0.66
CTNND1O60716 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNND1O60716 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.16■□□□□ 0.66
CTNND1O60716 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.16■□□□□ 0.66
CTNND1O60716 AC004790.1-201ENST00000612686 536 ntBASIC19.16■□□□□ 0.66
CTNND1O60716 MIR6752-201ENST00000618442 71 ntBASIC19.16■□□□□ 0.66
CTNND1O60716 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTNND1O60716 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNND1O60716 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNND1O60716 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTNND1O60716 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNND1O60716 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTNND1O60716 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CTNND1O60716 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.16■□□□□ 0.66
CTNND1O60716 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNND1O60716 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTNND1O60716 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNND1O60716 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTNND1O60716 AC099398.1-201ENST00000567919 2776 ntBASIC19.15■□□□□ 0.66
CTNND1O60716 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CTNND1O60716 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.15■□□□□ 0.66
CTNND1O60716 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNND1O60716 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTNND1O60716 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNND1O60716 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.15■□□□□ 0.66
CTNND1O60716 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNND1O60716 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CTNND1O60716 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.15■□□□□ 0.66
CTNND1O60716 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTNND1O60716 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
CTNND1O60716 ARSEP1-201ENST00000420443 635 ntBASIC19.15■□□□□ 0.66
CTNND1O60716 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
CTNND1O60716 AC007274.1-201ENST00000439805 662 ntBASIC19.15■□□□□ 0.66
CTNND1O60716 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.15■□□□□ 0.66
CTNND1O60716 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.15■□□□□ 0.66
CTNND1O60716 SDHAP3-202ENST00000515467 728 ntBASIC19.15■□□□□ 0.66
CTNND1O60716 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CTNND1O60716 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.15■□□□□ 0.66
CTNND1O60716 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms