Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.7□□□□□ -0.06
GMDSO60547 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.7□□□□□ -0.06
GMDSO60547 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.7□□□□□ -0.06
GMDSO60547 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GMDSO60547 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GMDSO60547 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GMDSO60547 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
GMDSO60547 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.69□□□□□ -0.06
GMDSO60547 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.69□□□□□ -0.06
GMDSO60547 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.69□□□□□ -0.06
GMDSO60547 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.69□□□□□ -0.06
GMDSO60547 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.69□□□□□ -0.06
GMDSO60547 AC126177.1-201ENST00000547829 2218 ntBASIC14.69□□□□□ -0.06
GMDSO60547 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
GMDSO60547 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.69□□□□□ -0.06
GMDSO60547 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
GMDSO60547 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 AC004870.1-201ENST00000315132 882 ntBASIC14.69□□□□□ -0.06
GMDSO60547 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.69□□□□□ -0.06
GMDSO60547 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
GMDSO60547 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.69□□□□□ -0.06
GMDSO60547 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 KRT126P-201ENST00000549467 1181 ntBASIC14.69□□□□□ -0.06
GMDSO60547 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.69□□□□□ -0.06
GMDSO60547 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.69□□□□□ -0.06
GMDSO60547 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.69□□□□□ -0.06
GMDSO60547 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.69□□□□□ -0.06
GMDSO60547 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.69□□□□□ -0.06
GMDSO60547 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.69□□□□□ -0.06
GMDSO60547 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.69□□□□□ -0.06
GMDSO60547 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.69□□□□□ -0.06
GMDSO60547 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
GMDSO60547 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GMDSO60547 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
GMDSO60547 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 TUBB8P12-201ENST00000308911 1335 ntBASIC14.68□□□□□ -0.06
GMDSO60547 TUBB7P-202ENST00000428444 1305 ntBASIC14.68□□□□□ -0.06
GMDSO60547 TUBB8P7-204ENST00000567960 1332 ntBASIC14.68□□□□□ -0.06
GMDSO60547 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.68□□□□□ -0.06
GMDSO60547 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.68□□□□□ -0.06
GMDSO60547 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.68□□□□□ -0.06
GMDSO60547 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GMDSO60547 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.68□□□□□ -0.06
GMDSO60547 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.68□□□□□ -0.06
GMDSO60547 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.68□□□□□ -0.06
GMDSO60547 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.68□□□□□ -0.06
GMDSO60547 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.68□□□□□ -0.06
GMDSO60547 EMBP1-201ENST00000458200 901 ntBASIC14.68□□□□□ -0.06
GMDSO60547 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.68□□□□□ -0.06
GMDSO60547 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.68□□□□□ -0.06
GMDSO60547 AC073648.2-201ENST00000510116 352 ntBASIC14.68□□□□□ -0.06
GMDSO60547 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.68□□□□□ -0.06
GMDSO60547 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
GMDSO60547 AL121912.1-201ENST00000603683 238 ntBASIC14.68□□□□□ -0.06
GMDSO60547 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
GMDSO60547 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.68□□□□□ -0.06
GMDSO60547 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
GMDSO60547 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.68□□□□□ -0.06
GMDSO60547 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.68□□□□□ -0.06
GMDSO60547 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GMDSO60547 AC007326.2-201ENST00000624224 7579 ntBASIC14.68□□□□□ -0.06
GMDSO60547 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms