Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 AC046158.3-201ENST00000624947 2558 ntBASIC16.38■□□□□ 0.21
PCDHGA12O60330 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGA12O60330 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGA12O60330 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA12O60330 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA12O60330 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA12O60330 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGA12O60330 AC105020.1-201ENST00000435356 2205 ntBASIC16.37■□□□□ 0.21
PCDHGA12O60330 PCDH8P1-201ENST00000428983 2773 ntBASIC16.37■□□□□ 0.21
PCDHGA12O60330 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGA12O60330 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA12O60330 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
PCDHGA12O60330 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGA12O60330 PIN1P1-201ENST00000412108 996 ntBASIC16.37■□□□□ 0.21
PCDHGA12O60330 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGA12O60330 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGA12O60330 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGA12O60330 AP005018.1-201ENST00000525475 301 ntBASIC16.37■□□□□ 0.21
PCDHGA12O60330 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGA12O60330 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGA12O60330 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGA12O60330 AC073592.8-201ENST00000624126 511 ntBASIC16.37■□□□□ 0.21
PCDHGA12O60330 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA12O60330 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA12O60330 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA12O60330 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA12O60330 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGA12O60330 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA12O60330 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA12O60330 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA12O60330 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGA12O60330 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGA12O60330 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGA12O60330 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 AC008894.3-201ENST00000624324 3103 ntBASIC16.36■□□□□ 0.21
PCDHGA12O60330 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 SERBP1P5-201ENST00000510079 1181 ntBASIC16.36■□□□□ 0.21
PCDHGA12O60330 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 SPDYE22P-201ENST00000582158 798 ntBASIC16.36■□□□□ 0.21
PCDHGA12O60330 AC016027.1-202ENST00000607927 1699 ntBASIC16.36■□□□□ 0.21
PCDHGA12O60330 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.36■□□□□ 0.21
PCDHGA12O60330 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA12O60330 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA12O60330 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 370.7 ms