Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM3A6NNA2 AL596087.1-201ENST00000400979 1969 ntBASIC17.18■□□□□ 0.34
SRRM3A6NNA2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.18■□□□□ 0.34
SRRM3A6NNA2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM3A6NNA2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM3A6NNA2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SRRM3A6NNA2 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM3A6NNA2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SRRM3A6NNA2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 AC009947.1-201ENST00000444350 727 ntBASIC17.17■□□□□ 0.34
SRRM3A6NNA2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 AP005117.1-201ENST00000584346 1413 ntBASIC17.17■□□□□ 0.34
SRRM3A6NNA2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 AC025062.2-201ENST00000605477 670 ntBASIC17.17■□□□□ 0.34
SRRM3A6NNA2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.17■□□□□ 0.34
SRRM3A6NNA2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 FRMD8P1-201ENST00000440433 1524 ntBASIC17.16■□□□□ 0.34
SRRM3A6NNA2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 AC013268.4-201ENST00000637413 2228 ntBASIC17.16■□□□□ 0.34
SRRM3A6NNA2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 AF228730.6-201ENST00000641497 218 ntBASIC17.16■□□□□ 0.34
SRRM3A6NNA2 AC084121.3-201ENST00000641716 218 ntBASIC17.16■□□□□ 0.34
SRRM3A6NNA2 AC105233.6-201ENST00000642093 218 ntBASIC17.16■□□□□ 0.34
SRRM3A6NNA2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 AP002414.3-201ENST00000589352 1468 ntBASIC17.16■□□□□ 0.34
SRRM3A6NNA2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.16■□□□□ 0.34
SRRM3A6NNA2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms