Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 AP000974.1-201ENST00000623909 2387 ntBASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 RPL13P2-201ENST00000440687 659 ntBASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 MIR4741-201ENST00000579822 90 ntBASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 EEF1DP1-201ENST00000585891 896 ntBASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 AC133963.1-201ENST00000504166 1679 ntBASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TMEM88BA6NKF7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 CYP4F24P-201ENST00000586049 1580 ntBASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 NDUFV2P1-201ENST00000596415 907 ntBASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 AC097724.1-201ENST00000609581 426 ntBASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 AC091812.3-201ENST00000621362 345 ntBASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TMEM88BA6NKF7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 AC016396.2-201ENST00000562575 1417 ntBASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 KRTAP19-9P-201ENST00000421795 191 ntBASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 MTX1P1-201ENST00000440904 838 ntBASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 FTLP1-201ENST00000449155 526 ntBASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 AC245884.6-201ENST00000515672 1067 ntBASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 AC005252.2-201ENST00000624630 1141 ntBASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TMEM88BA6NKF7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms