Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AC015922.1-201ENST00000421102 1152 ntBASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 AC004890.2-204ENST00000481968 304 ntBASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 SPTSSB-204ENST00000617024 1292 ntBASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 AL590560.3-201ENST00000623350 461 ntBASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CSNK1G3Q9Y6M4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 HLA-V-204ENST00000476601 1289 ntBASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 AC098859.1-201ENST00000502915 1238 ntBASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CSNK1G3Q9Y6M4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 FOXO1B-201ENST00000504678 1527 ntBASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 KRT8P39-201ENST00000396270 1433 ntBASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 AL353705.2-201ENST00000428243 662 ntBASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 AC100757.3-201ENST00000622361 1406 ntBASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.15■□□□□ 0.18
CSNK1G3Q9Y6M4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.14■□□□□ 0.18
CSNK1G3Q9Y6M4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
CSNK1G3Q9Y6M4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.14■□□□□ 0.18
CSNK1G3Q9Y6M4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms