Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 TUBB8P7-204ENST00000567960 1332 ntBASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 AC116353.5-201ENST00000638148 1699 ntBASIC15.83■□□□□ 0.12
PCDHGA1Q9Y5H4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 AL512361.1-201ENST00000554200 418 ntBASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 AC024267.1-201ENST00000582320 895 ntBASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 AC013467.2-201ENST00000605472 835 ntBASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 AC099568.2-201ENST00000609194 695 ntBASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 AC007431.3-201ENST00000623221 587 ntBASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 AC067852.2-201ENST00000590513 2313 ntBASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA1Q9Y5H4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 AC112492.5-201ENST00000421897 457 ntBASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 AC026979.3-201ENST00000607315 403 ntBASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDHGA1Q9Y5H4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA1Q9Y5H4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGA1Q9Y5H4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA1Q9Y5H4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
PCDHGA1Q9Y5H4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA1Q9Y5H4 PRORSD1P-202ENST00000563365 2154 ntBASIC15.8■□□□□ 0.12
PCDHGA1Q9Y5H4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.8■□□□□ 0.12
PCDHGA1Q9Y5H4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.8■□□□□ 0.12
PCDHGA1Q9Y5H4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA1Q9Y5H4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PCDHGA1Q9Y5H4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms