Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 AC138649.4-201ENST00000612222 287 ntBASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 MIR6080-201ENST00000617359 66 ntBASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
PCDHB2Q9Y5E7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 AL603756.1-201ENST00000606511 2163 ntBASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 AC142381.1-201ENST00000426099 345 ntBASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 AC093214.1-201ENST00000511688 1107 ntBASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 AC105233.2-201ENST00000523697 349 ntBASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 AF228730.5-201ENST00000530288 346 ntBASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.06■□□□□ 0.48
PCDHB2Q9Y5E7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 AC073389.1-201ENST00000595595 795 ntBASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCDHB2Q9Y5E7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 SNX33P1-201ENST00000592116 1762 ntBASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms