Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
LRCH1Q9Y2L9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 GPR89P-201ENST00000407924 1495 ntBASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 FLJ16779-201ENST00000612722 7638 ntBASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 INGX-201ENST00000359239 846 ntBASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 AC010203.1-204ENST00000548782 407 ntBASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 AC126755.1-201ENST00000525846 6405 ntBASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 AC020658.6-201ENST00000623564 1870 ntBASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LRCH1Q9Y2L9 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 AC005840.4-201ENST00000541242 2494 ntBASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 AC010331.1-201ENST00000611423 582 ntBASIC15.77■□□□□ 0.12
LRCH1Q9Y2L9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 AC232323.1-201ENST00000540724 2099 ntBASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 REXO1L5P-201ENST00000622260 2098 ntBASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LRCH1Q9Y2L9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms