Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 AC004987.2-201ENST00000395959 1148 ntBASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 MYCLP2-201ENST00000449268 967 ntBASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 RAB43P1-201ENST00000561790 589 ntBASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 RARRES2P5-201ENST00000564013 466 ntBASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SHANK2Q9UPX8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 PCDHB18P-201ENST00000524813 2368 ntBASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 KRT8P37-201ENST00000451609 1420 ntBASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SHANK2Q9UPX8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SHANK2Q9UPX8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SHANK2Q9UPX8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
SHANK2Q9UPX8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC24.14■■□□□ 1.46
SHANK2Q9UPX8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC24.14■■□□□ 1.46
SHANK2Q9UPX8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC24.14■■□□□ 1.46
SHANK2Q9UPX8 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC24.14■■□□□ 1.46
SHANK2Q9UPX8 AC243562.2-201ENST00000561247 970 ntBASIC24.14■■□□□ 1.46
SHANK2Q9UPX8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC24.14■■□□□ 1.46
SHANK2Q9UPX8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.46
SHANK2Q9UPX8 TMEM261P1-201ENST00000604899 340 ntBASIC24.14■■□□□ 1.46
SHANK2Q9UPX8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SHANK2Q9UPX8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC24.14■■□□□ 1.46
SHANK2Q9UPX8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
SHANK2Q9UPX8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
SHANK2Q9UPX8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SHANK2Q9UPX8 AL691432.1-201ENST00000596308 1422 ntBASIC24.14■■□□□ 1.45
SHANK2Q9UPX8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SHANK2Q9UPX8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.45
SHANK2Q9UPX8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC24.14■■□□□ 1.45
SHANK2Q9UPX8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SHANK2Q9UPX8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SHANK2Q9UPX8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SHANK2Q9UPX8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 FAM86MP-201ENST00000340703 885 ntBASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 AC011495.1-201ENST00000498085 584 ntBASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 USP32P1-208ENST00000506594 1164 ntBASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC24.13■■□□□ 1.45
SHANK2Q9UPX8 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SHANK2Q9UPX8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC24.12■■□□□ 1.45
SHANK2Q9UPX8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC24.12■■□□□ 1.45
SHANK2Q9UPX8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SHANK2Q9UPX8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SHANK2Q9UPX8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SHANK2Q9UPX8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
SHANK2Q9UPX8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
SHANK2Q9UPX8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms