Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC006033.1-201ENST00000440505 426 ntBASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 ZNF767P-206ENST00000513792 565 ntBASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 AC006538.1-201ENST00000567905 1585 ntBASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 AC009053.2-201ENST00000563701 2365 ntBASIC19.81■□□□□ 0.76
ZC3H4Q9UPT8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 YBX1P6-201ENST00000442962 1002 ntBASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 AC079316.1-201ENST00000548397 411 ntBASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 KRT8P22-201ENST00000562317 1415 ntBASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZC3H4Q9UPT8 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 AC061975.2-201ENST00000581722 295 ntBASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 PRORSD1P-202ENST00000563365 2154 ntBASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZC3H4Q9UPT8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms