Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC078925.2-201ENST00000624013 1973 ntBASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 RNU1-129P-201ENST00000384064 167 ntBASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 HLA-J-202ENST00000469281 1241 ntBASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 U1.21-201ENST00000580816 167 ntBASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 AC068137.2-201ENST00000605408 478 ntBASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PPARGC1AQ9UBK2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 PMS2P4-201ENST00000412466 1052 ntBASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 AC109635.5-201ENST00000533593 962 ntBASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 AP002472.1-201ENST00000577490 586 ntBASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 MTDHP5-201ENST00000598980 586 ntBASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 PCDHA1-201ENST00000378133 2726 ntBASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.25■□□□□ 0.35
PPARGC1AQ9UBK2 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 YBX2P1-201ENST00000394192 760 ntBASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 AL031055.1-201ENST00000606362 631 ntBASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PPARGC1AQ9UBK2 AC006538.1-201ENST00000567905 1585 ntBASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PPARGC1AQ9UBK2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms