Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
RPAP1Q9BWH6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RPAP1Q9BWH6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 AC026691.1-201ENST00000602502 2017 ntBASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 AL662844.4-201ENST00000606367 2838 ntBASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RPAP1Q9BWH6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPAP1Q9BWH6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPAP1Q9BWH6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RPAP1Q9BWH6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPAP1Q9BWH6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RPAP1Q9BWH6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 AP000842.3-202ENST00000569238 1080 ntBASIC20■□□□□ 0.79
RPAP1Q9BWH6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPAP1Q9BWH6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPAP1Q9BWH6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPAP1Q9BWH6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPAP1Q9BWH6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20■□□□□ 0.79
RPAP1Q9BWH6 SLC9A3P2-201ENST00000447821 2021 ntBASIC20■□□□□ 0.79
RPAP1Q9BWH6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20■□□□□ 0.79
RPAP1Q9BWH6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 UXT-AS1-201ENST00000590504 1525 ntBASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 MIR661-201ENST00000384842 89 ntBASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 FAM207CP-201ENST00000443486 507 ntBASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 INGX-202ENST00000489074 768 ntBASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 AC190387.1-201ENST00000551683 408 ntBASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 AC008677.1-201ENST00000519230 1561 ntBASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 AL391005.1-201ENST00000623953 2435 ntBASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 KRT8P39-201ENST00000396270 1433 ntBASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms