Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SHANK2-AS3Q9BTD1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SHANK2-AS3Q9BTD1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SHANK2-AS3Q9BTD1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SHANK2-AS3Q9BTD1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SHANK2-AS3Q9BTD1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 REXO1L8P-201ENST00000604378 1897 ntBASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 LAGE3P1-201ENST00000425356 484 ntBASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 MIR3652-201ENST00000579335 131 ntBASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC006504.4-201ENST00000592118 1568 ntBASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.76□□□□□ -0.37
SHANK2-AS3Q9BTD1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC010491.1-201ENST00000563101 2797 ntBASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 KRT18P31-201ENST00000506277 1292 ntBASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC129492.6-201ENST00000611383 1305 ntBASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 GGTLC5P-201ENST00000617623 998 ntBASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SHANK2-AS3Q9BTD1 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms