Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 FRMD8P1-201ENST00000440433 1524 ntBASIC11.57□□□□□ -0.56
UPK3BQ9BT76 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 FAM58CP-201ENST00000435741 640 ntBASIC11.57□□□□□ -0.56
UPK3BQ9BT76 AC140658.5-201ENST00000438532 169 ntBASIC11.57□□□□□ -0.56
UPK3BQ9BT76 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 MIR3909-201ENST00000579518 119 ntBASIC11.57□□□□□ -0.56
UPK3BQ9BT76 MIR4469-201ENST00000583919 79 ntBASIC11.57□□□□□ -0.56
UPK3BQ9BT76 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 AC091812.2-201ENST00000619081 385 ntBASIC11.57□□□□□ -0.56
UPK3BQ9BT76 AC055717.3-201ENST00000622967 595 ntBASIC11.57□□□□□ -0.56
UPK3BQ9BT76 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 AC134684.3-201ENST00000641758 218 ntBASIC11.57□□□□□ -0.56
UPK3BQ9BT76 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 TUBB8P12-201ENST00000308911 1335 ntBASIC11.57□□□□□ -0.56
UPK3BQ9BT76 TUBB7P-202ENST00000428444 1305 ntBASIC11.57□□□□□ -0.56
UPK3BQ9BT76 TUBB8P7-204ENST00000567960 1332 ntBASIC11.57□□□□□ -0.56
UPK3BQ9BT76 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
UPK3BQ9BT76 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 AC012569.1-201ENST00000591191 1524 ntBASIC11.56□□□□□ -0.56
UPK3BQ9BT76 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 URGCP-206ENST00000446958 365 ntTSL 2 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 DUX4L17-201ENST00000557360 1267 ntBASIC11.56□□□□□ -0.56
UPK3BQ9BT76 AP002472.1-201ENST00000577490 586 ntBASIC11.56□□□□□ -0.56
UPK3BQ9BT76 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 AP001160.2-201ENST00000596071 487 ntBASIC11.56□□□□□ -0.56
UPK3BQ9BT76 KRT8P49-201ENST00000604166 1432 ntBASIC11.56□□□□□ -0.56
UPK3BQ9BT76 AL078644.1-201ENST00000609881 752 ntBASIC11.56□□□□□ -0.56
UPK3BQ9BT76 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 HARS-203ENST00000431330 1774 ntTSL 2 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms