Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SEC22CQ9BRL7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC22CQ9BRL7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SEC22CQ9BRL7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC22CQ9BRL7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 AL671710.1-201ENST00000610245 2349 ntBASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 RPS2P55-201ENST00000397318 883 ntBASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 AC128676.1-201ENST00000454392 318 ntBASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 AC005089.1-201ENST00000619486 2241 ntBASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22CQ9BRL7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 OR2I1P-210ENST00000642037 4691 ntBASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 AC069224.1-201ENST00000566372 1715 ntBASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22CQ9BRL7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 AL021920.2-201ENST00000624828 1351 ntBASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22CQ9BRL7 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SEC22CQ9BRL7 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms