Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VGLL1Q99990 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
VGLL1Q99990 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.62□□□□□ -0.39
VGLL1Q99990 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.62□□□□□ -0.39
VGLL1Q99990 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
VGLL1Q99990 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.62□□□□□ -0.39
VGLL1Q99990 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.62□□□□□ -0.39
VGLL1Q99990 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 GGT3P-204ENST00000453783 1664 ntBASIC12.61□□□□□ -0.39
VGLL1Q99990 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.61□□□□□ -0.39
VGLL1Q99990 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
VGLL1Q99990 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
VGLL1Q99990 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
VGLL1Q99990 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
VGLL1Q99990 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.61□□□□□ -0.39
VGLL1Q99990 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.61□□□□□ -0.39
VGLL1Q99990 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.61□□□□□ -0.39
VGLL1Q99990 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
VGLL1Q99990 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.61□□□□□ -0.39
VGLL1Q99990 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.61□□□□□ -0.39
VGLL1Q99990 BX005266.1-201ENST00000473402 457 ntBASIC12.61□□□□□ -0.39
VGLL1Q99990 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.61□□□□□ -0.39
VGLL1Q99990 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.61□□□□□ -0.39
VGLL1Q99990 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.61□□□□□ -0.39
VGLL1Q99990 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
VGLL1Q99990 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.61□□□□□ -0.39
VGLL1Q99990 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.61□□□□□ -0.39
VGLL1Q99990 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC12.61□□□□□ -0.39
VGLL1Q99990 AC064862.7-201ENST00000604520 867 ntBASIC12.61□□□□□ -0.39
VGLL1Q99990 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
VGLL1Q99990 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.61□□□□□ -0.39
VGLL1Q99990 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.61□□□□□ -0.39
VGLL1Q99990 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.61□□□□□ -0.39
VGLL1Q99990 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 AC063926.3-201ENST00000624734 5658 ntBASIC12.61□□□□□ -0.39
VGLL1Q99990 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.61□□□□□ -0.39
VGLL1Q99990 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.61□□□□□ -0.39
VGLL1Q99990 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VGLL1Q99990 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.61□□□□□ -0.39
VGLL1Q99990 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
VGLL1Q99990 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.6□□□□□ -0.39
VGLL1Q99990 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.6□□□□□ -0.39
VGLL1Q99990 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
VGLL1Q99990 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
VGLL1Q99990 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.6□□□□□ -0.39
VGLL1Q99990 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.6□□□□□ -0.39
VGLL1Q99990 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.6□□□□□ -0.39
VGLL1Q99990 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.6□□□□□ -0.39
VGLL1Q99990 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.6□□□□□ -0.39
VGLL1Q99990 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
VGLL1Q99990 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.6□□□□□ -0.39
VGLL1Q99990 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.6□□□□□ -0.39
VGLL1Q99990 AC012615.1-201ENST00000565797 1299 ntBASIC12.6□□□□□ -0.39
VGLL1Q99990 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC12.6□□□□□ -0.39
VGLL1Q99990 AL591684.3-201ENST00000605187 298 ntBASIC12.6□□□□□ -0.39
VGLL1Q99990 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.6□□□□□ -0.39
VGLL1Q99990 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
VGLL1Q99990 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.6□□□□□ -0.39
VGLL1Q99990 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms