Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.27■□□□□ 0.36
SMOQ99835 CYMP-203ENST00000474680 1263 ntBASIC17.27■□□□□ 0.36
SMOQ99835 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.27■□□□□ 0.36
SMOQ99835 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.27■□□□□ 0.36
SMOQ99835 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.27■□□□□ 0.36
SMOQ99835 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMOQ99835 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMOQ99835 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SMOQ99835 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SMOQ99835 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SMOQ99835 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMOQ99835 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.27■□□□□ 0.35
SMOQ99835 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.27■□□□□ 0.35
SMOQ99835 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.27■□□□□ 0.35
SMOQ99835 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMOQ99835 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.27■□□□□ 0.35
SMOQ99835 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMOQ99835 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMOQ99835 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.27■□□□□ 0.35
SMOQ99835 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMOQ99835 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMOQ99835 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.26■□□□□ 0.35
SMOQ99835 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMOQ99835 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMOQ99835 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMOQ99835 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMOQ99835 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SMOQ99835 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMOQ99835 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.26■□□□□ 0.35
SMOQ99835 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.26■□□□□ 0.35
SMOQ99835 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMOQ99835 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.26■□□□□ 0.35
SMOQ99835 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
SMOQ99835 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMOQ99835 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.26■□□□□ 0.35
SMOQ99835 AC051619.7-201ENST00000568314 623 ntBASIC17.26■□□□□ 0.35
SMOQ99835 MIR4453-201ENST00000584019 89 ntBASIC17.26■□□□□ 0.35
SMOQ99835 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
SMOQ99835 AC018529.1-201ENST00000613063 361 ntBASIC17.26■□□□□ 0.35
SMOQ99835 MIR6080-201ENST00000617359 66 ntBASIC17.26■□□□□ 0.35
SMOQ99835 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SMOQ99835 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
SMOQ99835 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMOQ99835 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.26■□□□□ 0.35
SMOQ99835 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
SMOQ99835 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMOQ99835 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMOQ99835 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMOQ99835 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.26■□□□□ 0.35
SMOQ99835 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMOQ99835 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMOQ99835 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMOQ99835 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SMOQ99835 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.25■□□□□ 0.35
SMOQ99835 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.25■□□□□ 0.35
SMOQ99835 TUBB3P1-201ENST00000405796 1332 ntBASIC17.25■□□□□ 0.35
SMOQ99835 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMOQ99835 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.25■□□□□ 0.35
SMOQ99835 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
SMOQ99835 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.25■□□□□ 0.35
SMOQ99835 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 SPDYE7P-202ENST00000420373 878 ntBASIC17.25■□□□□ 0.35
SMOQ99835 CNN2P2-201ENST00000443536 909 ntBASIC17.25■□□□□ 0.35
SMOQ99835 CNN2P3-201ENST00000450201 906 ntBASIC17.25■□□□□ 0.35
SMOQ99835 POU5F1P6-201ENST00000466990 990 ntBASIC17.25■□□□□ 0.35
SMOQ99835 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.25■□□□□ 0.35
SMOQ99835 RNA5SP410-201ENST00000516285 106 ntBASIC17.25■□□□□ 0.35
SMOQ99835 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.25■□□□□ 0.35
SMOQ99835 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SMOQ99835 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.25■□□□□ 0.35
SMOQ99835 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 AC093512.1-201ENST00000617969 520 ntBASIC17.25■□□□□ 0.35
SMOQ99835 AL136317.3-201ENST00000618497 906 ntBASIC17.25■□□□□ 0.35
SMOQ99835 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SMOQ99835 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.25■□□□□ 0.35
SMOQ99835 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMOQ99835 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.25■□□□□ 0.35
SMOQ99835 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.25■□□□□ 0.35
SMOQ99835 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMOQ99835 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.25■□□□□ 0.35
SMOQ99835 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SMOQ99835 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMOQ99835 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMOQ99835 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms