Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PHOX2BQ99453 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.73■□□□□ 0.27
PHOX2BQ99453 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.73■□□□□ 0.27
PHOX2BQ99453 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PHOX2BQ99453 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 TUBB1P2-201ENST00000422712 1306 ntBASIC16.72■□□□□ 0.27
PHOX2BQ99453 TUBB1P1-201ENST00000503144 1300 ntBASIC16.72■□□□□ 0.27
PHOX2BQ99453 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.72■□□□□ 0.27
PHOX2BQ99453 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.72■□□□□ 0.27
PHOX2BQ99453 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PHOX2BQ99453 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.72■□□□□ 0.27
PHOX2BQ99453 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.72■□□□□ 0.27
PHOX2BQ99453 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PHOX2BQ99453 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.72■□□□□ 0.27
PHOX2BQ99453 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.72■□□□□ 0.27
PHOX2BQ99453 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.72■□□□□ 0.27
PHOX2BQ99453 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.72■□□□□ 0.27
PHOX2BQ99453 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.72■□□□□ 0.27
PHOX2BQ99453 AC109635.5-201ENST00000533593 962 ntBASIC16.72■□□□□ 0.27
PHOX2BQ99453 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.72■□□□□ 0.27
PHOX2BQ99453 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PHOX2BQ99453 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHOX2BQ99453 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 BOLA2P3-201ENST00000404566 256 ntBASIC16.71■□□□□ 0.27
PHOX2BQ99453 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 AC099336.1-201ENST00000417053 1171 ntBASIC16.71■□□□□ 0.27
PHOX2BQ99453 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 MTND6P24-201ENST00000440466 518 ntBASIC16.71■□□□□ 0.27
PHOX2BQ99453 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 AC016629.1-201ENST00000596579 586 ntBASIC16.71■□□□□ 0.27
PHOX2BQ99453 AC106872.11-201ENST00000605838 421 ntBASIC16.71■□□□□ 0.27
PHOX2BQ99453 AL589739.1-201ENST00000607720 493 ntBASIC16.71■□□□□ 0.27
PHOX2BQ99453 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.71■□□□□ 0.27
PHOX2BQ99453 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PHOX2BQ99453 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PHOX2BQ99453 AC011270.2-201ENST00000624293 2550 ntBASIC16.71■□□□□ 0.26
PHOX2BQ99453 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
PHOX2BQ99453 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 AC008764.6-201ENST00000595909 2069 ntBASIC16.7■□□□□ 0.26
PHOX2BQ99453 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PHOX2BQ99453 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.7■□□□□ 0.26
PHOX2BQ99453 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms