Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 RRP7BP-205ENST00000566851 833 ntBASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 AL033527.5-202ENST00000641632 1098 ntBASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSMD1Q96PZ7 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 AL008638.5-201ENST00000623814 1298 ntBASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 PFN1P12-201ENST00000455938 534 ntBASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.88□□□□□ -0.19
CSMD1Q96PZ7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 AC099398.1-201ENST00000567919 2776 ntBASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 SDHAP3-202ENST00000515467 728 ntBASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 MIR3619-201ENST00000579667 83 ntBASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 LYSMD4-203ENST00000378904 2122 ntBASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSMD1Q96PZ7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms