Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 AL080243.2-201ENST00000418783 582 ntBASIC19.16■□□□□ 0.66
CCDC17Q96LX7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 AC009477.1-201ENST00000452936 217 ntBASIC19.16■□□□□ 0.66
CCDC17Q96LX7 POU5F1P6-201ENST00000466990 990 ntBASIC19.16■□□□□ 0.66
CCDC17Q96LX7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC17Q96LX7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 AC190387.1-201ENST00000551683 408 ntBASIC19.15■□□□□ 0.66
CCDC17Q96LX7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 AL844908.2-201ENST00000609461 460 ntBASIC19.15■□□□□ 0.66
CCDC17Q96LX7 AC009118.2-201ENST00000613275 655 ntBASIC19.15■□□□□ 0.66
CCDC17Q96LX7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC17Q96LX7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CCDC17Q96LX7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC17Q96LX7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CCDC17Q96LX7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC17Q96LX7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 SPDYE17-201ENST00000412399 783 ntBASIC19.14■□□□□ 0.65
CCDC17Q96LX7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CCDC17Q96LX7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC17Q96LX7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms