Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 IGHGP-201ENST00000390555 1178 ntBASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 TMPOP1-202ENST00000424642 1267 ntBASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 AC103564.2-201ENST00000432853 1299 ntBASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 HLA-F-220ENST00000434407 884 ntBASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 AC104076.2-201ENST00000448912 469 ntBASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 LINC01238-205ENST00000567549 1107 ntBASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 AL353692.3-201ENST00000407031 1396 ntBASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CHMP6Q96FZ7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 SSR4P1-203ENST00000599569 2260 ntBASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 KRT18P21-201ENST00000515767 1272 ntBASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 AC013467.2-201ENST00000605472 835 ntBASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CHMP6Q96FZ7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
CHMP6Q96FZ7 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CHMP6Q96FZ7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 AC006277.1-201ENST00000624348 1610 ntBASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CHMP6Q96FZ7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms