Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 AC129492.6-201ENST00000611383 1305 ntBASIC17.1■□□□□ 0.33
IFT43Q96FT9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
IFT43Q96FT9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFT43Q96FT9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
IFT43Q96FT9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.09■□□□□ 0.33
IFT43Q96FT9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
IFT43Q96FT9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
IFT43Q96FT9 AP006288.1-201ENST00000446065 395 ntBASIC17.09■□□□□ 0.33
IFT43Q96FT9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.09■□□□□ 0.33
IFT43Q96FT9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
IFT43Q96FT9 YBX1P5-201ENST00000509441 847 ntBASIC17.09■□□□□ 0.33
IFT43Q96FT9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
IFT43Q96FT9 AC005829.1-201ENST00000570002 483 ntBASIC17.09■□□□□ 0.33
IFT43Q96FT9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.09■□□□□ 0.33
IFT43Q96FT9 AC134684.3-201ENST00000641758 218 ntBASIC17.09■□□□□ 0.33
IFT43Q96FT9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.09■□□□□ 0.33
IFT43Q96FT9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 AL391256.1-201ENST00000443260 1855 ntBASIC17.09■□□□□ 0.33
IFT43Q96FT9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
IFT43Q96FT9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 AC007950.2-201ENST00000615045 2347 ntBASIC17.09■□□□□ 0.33
IFT43Q96FT9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
IFT43Q96FT9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.09■□□□□ 0.33
IFT43Q96FT9 AC023824.1-201ENST00000562945 2975 ntBASIC17.09■□□□□ 0.33
IFT43Q96FT9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IFT43Q96FT9 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.09■□□□□ 0.33
IFT43Q96FT9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
IFT43Q96FT9 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IFT43Q96FT9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IFT43Q96FT9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.08■□□□□ 0.33
IFT43Q96FT9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IFT43Q96FT9 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IFT43Q96FT9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
IFT43Q96FT9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IFT43Q96FT9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.08■□□□□ 0.33
IFT43Q96FT9 RNF216P1-203ENST00000404404 2427 ntBASIC17.08■□□□□ 0.33
IFT43Q96FT9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.08■□□□□ 0.33
IFT43Q96FT9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.08■□□□□ 0.33
IFT43Q96FT9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IFT43Q96FT9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFT43Q96FT9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.08■□□□□ 0.32
IFT43Q96FT9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.08■□□□□ 0.32
IFT43Q96FT9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
IFT43Q96FT9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
IFT43Q96FT9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.08■□□□□ 0.32
IFT43Q96FT9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IFT43Q96FT9 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFT43Q96FT9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.08■□□□□ 0.32
IFT43Q96FT9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFT43Q96FT9 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFT43Q96FT9 REXO1L3P-201ENST00000622202 1288 ntBASIC17.08■□□□□ 0.32
IFT43Q96FT9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFT43Q96FT9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.08■□□□□ 0.32
IFT43Q96FT9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
IFT43Q96FT9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
IFT43Q96FT9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms