Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.66■□□□□ 0.74
DDX11Q96FC9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
DDX11Q96FC9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.66■□□□□ 0.74
DDX11Q96FC9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DDX11Q96FC9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.66■□□□□ 0.74
DDX11Q96FC9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.66■□□□□ 0.74
DDX11Q96FC9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.66■□□□□ 0.74
DDX11Q96FC9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX11Q96FC9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX11Q96FC9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX11Q96FC9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX11Q96FC9 DOC2GP-204ENST00000639052 2548 ntBASIC19.65■□□□□ 0.74
DDX11Q96FC9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX11Q96FC9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDX11Q96FC9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX11Q96FC9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX11Q96FC9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX11Q96FC9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDX11Q96FC9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX11Q96FC9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 AP000344.2-201ENST00000512987 629 ntBASIC19.65■□□□□ 0.74
DDX11Q96FC9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DDX11Q96FC9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 REXO1L3P-201ENST00000622202 1288 ntBASIC19.65■□□□□ 0.74
DDX11Q96FC9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX11Q96FC9 TOP3BP1-201ENST00000420768 1380 ntBASIC19.65■□□□□ 0.74
DDX11Q96FC9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.65■□□□□ 0.74
DDX11Q96FC9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX11Q96FC9 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DDX11Q96FC9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
DDX11Q96FC9 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.64■□□□□ 0.74
DDX11Q96FC9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.64■□□□□ 0.74
DDX11Q96FC9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
DDX11Q96FC9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.64■□□□□ 0.74
DDX11Q96FC9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
DDX11Q96FC9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.64■□□□□ 0.74
DDX11Q96FC9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.64■□□□□ 0.74
DDX11Q96FC9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DDX11Q96FC9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.64■□□□□ 0.73
DDX11Q96FC9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
DDX11Q96FC9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX11Q96FC9 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.64■□□□□ 0.73
DDX11Q96FC9 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
DDX11Q96FC9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX11Q96FC9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX11Q96FC9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.64■□□□□ 0.73
DDX11Q96FC9 AC092902.6-201ENST00000641783 218 ntBASIC19.64■□□□□ 0.73
DDX11Q96FC9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX11Q96FC9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX11Q96FC9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.64■□□□□ 0.73
DDX11Q96FC9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.64■□□□□ 0.73
DDX11Q96FC9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX11Q96FC9 AL671710.1-201ENST00000610245 2349 ntBASIC19.64■□□□□ 0.73
DDX11Q96FC9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.64■□□□□ 0.73
DDX11Q96FC9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
DDX11Q96FC9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DDX11Q96FC9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
DDX11Q96FC9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.63■□□□□ 0.73
DDX11Q96FC9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
DDX11Q96FC9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.63■□□□□ 0.73
DDX11Q96FC9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.63■□□□□ 0.73
DDX11Q96FC9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
DDX11Q96FC9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.63■□□□□ 0.73
DDX11Q96FC9 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
DDX11Q96FC9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.63■□□□□ 0.73
DDX11Q96FC9 AC027612.4-201ENST00000605371 583 ntBASIC19.63■□□□□ 0.73
DDX11Q96FC9 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.63■□□□□ 0.73
DDX11Q96FC9 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DDX11Q96FC9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms