Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTP4Q96DX8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTP4Q96DX8 CRYGEP-201ENST00000412192 528 ntBASIC16.83■□□□□ 0.28
RTP4Q96DX8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RTP4Q96DX8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
RTP4Q96DX8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RTP4Q96DX8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RTP4Q96DX8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.83■□□□□ 0.28
RTP4Q96DX8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
RTP4Q96DX8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTP4Q96DX8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.83■□□□□ 0.28
RTP4Q96DX8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.83■□□□□ 0.28
RTP4Q96DX8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.83■□□□□ 0.28
RTP4Q96DX8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RTP4Q96DX8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.83■□□□□ 0.28
RTP4Q96DX8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RTP4Q96DX8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.83■□□□□ 0.28
RTP4Q96DX8 AC092919.2-201ENST00000623631 1645 ntBASIC16.83■□□□□ 0.28
RTP4Q96DX8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.83■□□□□ 0.28
RTP4Q96DX8 U82695.1-201ENST00000635752 1889 ntBASIC16.83■□□□□ 0.28
RTP4Q96DX8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTP4Q96DX8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTP4Q96DX8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTP4Q96DX8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RTP4Q96DX8 AC008741.2-201ENST00000612792 3115 ntBASIC16.83■□□□□ 0.28
RTP4Q96DX8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.82■□□□□ 0.28
RTP4Q96DX8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RTP4Q96DX8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTP4Q96DX8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTP4Q96DX8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTP4Q96DX8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTP4Q96DX8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTP4Q96DX8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 AC093724.1-201ENST00000448659 1027 ntBASIC16.81■□□□□ 0.28
RTP4Q96DX8 KRT18P3-201ENST00000451602 1288 ntBASIC16.81■□□□□ 0.28
RTP4Q96DX8 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RTP4Q96DX8 AL009183.1-201ENST00000603760 355 ntBASIC16.81■□□□□ 0.28
RTP4Q96DX8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTP4Q96DX8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTP4Q96DX8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTP4Q96DX8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RTP4Q96DX8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RTP4Q96DX8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RTP4Q96DX8 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RTP4Q96DX8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms