Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRQ92834 AC106886.1-201ENST00000568660 600 ntBASIC20.22■□□□□ 0.83
RPGRQ92834 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
RPGRQ92834 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRQ92834 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RPGRQ92834 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRQ92834 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.22■□□□□ 0.83
RPGRQ92834 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RPGRQ92834 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.22■□□□□ 0.83
RPGRQ92834 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.22■□□□□ 0.83
RPGRQ92834 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRQ92834 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.22■□□□□ 0.83
RPGRQ92834 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RPGRQ92834 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.22■□□□□ 0.83
RPGRQ92834 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPGRQ92834 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RPGRQ92834 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRQ92834 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RPGRQ92834 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.21■□□□□ 0.83
RPGRQ92834 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RPGRQ92834 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.21■□□□□ 0.83
RPGRQ92834 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRQ92834 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRQ92834 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRQ92834 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRQ92834 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RPGRQ92834 MIR658-201ENST00000385210 100 ntBASIC20.21■□□□□ 0.83
RPGRQ92834 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRQ92834 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.21■□□□□ 0.83
RPGRQ92834 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.21■□□□□ 0.83
RPGRQ92834 AC123567.1-201ENST00000548294 1261 ntBASIC20.21■□□□□ 0.83
RPGRQ92834 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRQ92834 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRQ92834 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.21■□□□□ 0.83
RPGRQ92834 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.21■□□□□ 0.83
RPGRQ92834 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.21■□□□□ 0.83
RPGRQ92834 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRQ92834 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RPGRQ92834 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RPGRQ92834 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPGRQ92834 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
RPGRQ92834 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.2■□□□□ 0.82
RPGRQ92834 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRQ92834 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RPGRQ92834 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRQ92834 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RPGRQ92834 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRQ92834 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRQ92834 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.2■□□□□ 0.82
RPGRQ92834 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRQ92834 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.2■□□□□ 0.82
RPGRQ92834 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RPGRQ92834 RPS2P32-201ENST00000439199 892 ntBASIC20.2■□□□□ 0.82
RPGRQ92834 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRQ92834 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.2■□□□□ 0.82
RPGRQ92834 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.2■□□□□ 0.82
RPGRQ92834 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.2■□□□□ 0.82
RPGRQ92834 AL589987.1-201ENST00000453380 819 ntBASIC20.2■□□□□ 0.82
RPGRQ92834 AL139010.1-201ENST00000454878 894 ntBASIC20.2■□□□□ 0.82
RPGRQ92834 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRQ92834 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.2■□□□□ 0.82
RPGRQ92834 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRQ92834 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RPGRQ92834 AC099568.2-201ENST00000609194 695 ntBASIC20.2■□□□□ 0.82
RPGRQ92834 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RPGRQ92834 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRQ92834 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RPGRQ92834 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRQ92834 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRQ92834 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RPGRQ92834 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRQ92834 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
RPGRQ92834 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPGRQ92834 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RPGRQ92834 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRQ92834 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRQ92834 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RPGRQ92834 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.19■□□□□ 0.82
RPGRQ92834 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRQ92834 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRQ92834 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRQ92834 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRQ92834 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRQ92834 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRQ92834 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.19■□□□□ 0.82
RPGRQ92834 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.19■□□□□ 0.82
RPGRQ92834 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.19■□□□□ 0.82
RPGRQ92834 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRQ92834 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.19■□□□□ 0.82
RPGRQ92834 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRQ92834 ELK1P1-201ENST00000485699 580 ntBASIC20.19■□□□□ 0.82
RPGRQ92834 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRQ92834 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.19■□□□□ 0.82
RPGRQ92834 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.19■□□□□ 0.82
RPGRQ92834 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RPGRQ92834 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC20.19■□□□□ 0.82
RPGRQ92834 CTBP2P3-201ENST00000585629 1255 ntBASIC20.19■□□□□ 0.82
RPGRQ92834 MIR6799-201ENST00000620297 69 ntBASIC20.19■□□□□ 0.82
RPGRQ92834 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.19■□□□□ 0.82
RPGRQ92834 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms