Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC012441.1-201ENST00000446669 685 ntBASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 SCARNA20.5-201ENST00000516991 142 ntBASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 AL031731.1-201ENST00000642131 2094 ntBASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 AP001063.1-201ENST00000568332 529 ntBASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 MIR5572-201ENST00000583188 137 ntBASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 AC004898.1-201ENST00000451057 766 ntBASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 AC124947.2-201ENST00000547118 1133 ntBASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 AC120045.2-201ENST00000567334 178 ntBASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 FGFR3P5-201ENST00000564496 886 ntBASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 HCG18-245ENST00000602550 559 ntTSL 4 BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 AC097724.1-201ENST00000609581 426 ntBASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
ALMS1Q8TCU4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 MPRIPP1-201ENST00000452433 1089 ntBASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 AL138688.1-201ENST00000624851 1594 ntBASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 AC006001.1-201ENST00000325130 474 ntBASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
ALMS1Q8TCU4 AL138781.2-201ENST00000617896 1843 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms