Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 RN7SL589P-201ENST00000481268 310 ntBASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 KRT8P48-201ENST00000515599 1220 ntBASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 AL135744.1-201ENST00000565098 629 ntBASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 AC004835.2-201ENST00000603762 682 ntBASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
FNDC9Q8TBE3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 AC005915.1-201ENST00000624912 2018 ntBASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 AP002490.2-201ENST00000524791 560 ntBASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 AC027612.4-201ENST00000605371 583 ntBASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 WASH6P-202ENST00000359512 1437 ntBASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 AKAP8P1-201ENST00000434743 1349 ntBASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
FNDC9Q8TBE3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.89□□□□□ -0.03
FNDC9Q8TBE3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms