Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MEP1AP4-201ENST00000423244 1087 ntBASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC25.42■■□□□ 1.66
CFAP43Q8NDM7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 AL583810.1-201ENST00000553344 1045 ntBASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC25.41■■□□□ 1.66
CFAP43Q8NDM7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 MIR4321-201ENST00000592276 80 ntBASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 PDIA3P1-201ENST00000471856 1510 ntBASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CFAP43Q8NDM7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC25.39■■□□□ 1.66
CFAP43Q8NDM7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CFAP43Q8NDM7 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC25.39■■□□□ 1.66
CFAP43Q8NDM7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC25.39■■□□□ 1.66
CFAP43Q8NDM7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
CFAP43Q8NDM7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC25.39■■□□□ 1.66
CFAP43Q8NDM7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 AL033527.5-202ENST00000641632 1098 ntBASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
CFAP43Q8NDM7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 RN7SL219P-201ENST00000582872 296 ntBASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 AL139099.5-201ENST00000635274 300 ntBASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 AC005332.8-201ENST00000622750 2735 ntBASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CFAP43Q8NDM7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 AC099336.1-201ENST00000417053 1171 ntBASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC25.37■■□□□ 1.65
CFAP43Q8NDM7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms