Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLDN22Q8N7P3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 GPAA1P2-202ENST00000606848 1787 ntBASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CLDN22Q8N7P3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 PCGF3-213ENST00000620529 1899 ntBASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 AC139887.3-201ENST00000568585 713 ntBASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 AC004706.3-202ENST00000621574 984 ntBASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 AC006504.4-201ENST00000592118 1568 ntBASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms