Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.12■□□□□ 0.33
SCML4Q8N228 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SCML4Q8N228 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.12■□□□□ 0.33
SCML4Q8N228 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.12■□□□□ 0.33
SCML4Q8N228 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.11■□□□□ 0.33
SCML4Q8N228 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.11■□□□□ 0.33
SCML4Q8N228 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.11■□□□□ 0.33
SCML4Q8N228 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SCML4Q8N228 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.11■□□□□ 0.33
SCML4Q8N228 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.11■□□□□ 0.33
SCML4Q8N228 METTL21AP1-201ENST00000438852 635 ntBASIC17.11■□□□□ 0.33
SCML4Q8N228 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.11■□□□□ 0.33
SCML4Q8N228 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.11■□□□□ 0.33
SCML4Q8N228 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SCML4Q8N228 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.11■□□□□ 0.33
SCML4Q8N228 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.11■□□□□ 0.33
SCML4Q8N228 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.11■□□□□ 0.33
SCML4Q8N228 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.11■□□□□ 0.33
SCML4Q8N228 MIR4321-201ENST00000592276 80 ntBASIC17.11■□□□□ 0.33
SCML4Q8N228 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.11■□□□□ 0.33
SCML4Q8N228 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.11■□□□□ 0.33
SCML4Q8N228 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SCML4Q8N228 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.11■□□□□ 0.33
SCML4Q8N228 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.11■□□□□ 0.33
SCML4Q8N228 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.11■□□□□ 0.33
SCML4Q8N228 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.11■□□□□ 0.33
SCML4Q8N228 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.11■□□□□ 0.33
SCML4Q8N228 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.11■□□□□ 0.33
SCML4Q8N228 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCML4Q8N228 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.11■□□□□ 0.33
SCML4Q8N228 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SCML4Q8N228 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SCML4Q8N228 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCML4Q8N228 AL139384.1-201ENST00000612143 3047 ntBASIC17.1■□□□□ 0.33
SCML4Q8N228 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCML4Q8N228 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCML4Q8N228 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SCML4Q8N228 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.1■□□□□ 0.33
SCML4Q8N228 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
SCML4Q8N228 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCML4Q8N228 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCML4Q8N228 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCML4Q8N228 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.1■□□□□ 0.33
SCML4Q8N228 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.1■□□□□ 0.33
SCML4Q8N228 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCML4Q8N228 AC018529.1-201ENST00000613063 361 ntBASIC17.1■□□□□ 0.33
SCML4Q8N228 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.1■□□□□ 0.33
SCML4Q8N228 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.1■□□□□ 0.33
SCML4Q8N228 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCML4Q8N228 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCML4Q8N228 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SCML4Q8N228 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.1■□□□□ 0.33
SCML4Q8N228 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SCML4Q8N228 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCML4Q8N228 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SCML4Q8N228 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCML4Q8N228 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SCML4Q8N228 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCML4Q8N228 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCML4Q8N228 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SCML4Q8N228 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SCML4Q8N228 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.09■□□□□ 0.33
SCML4Q8N228 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.09■□□□□ 0.33
SCML4Q8N228 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 PMS2P2-201ENST00000425039 1128 ntBASIC17.09■□□□□ 0.33
SCML4Q8N228 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SCML4Q8N228 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.09■□□□□ 0.33
SCML4Q8N228 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.09■□□□□ 0.33
SCML4Q8N228 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
SCML4Q8N228 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.09■□□□□ 0.33
SCML4Q8N228 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.09■□□□□ 0.33
SCML4Q8N228 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCML4Q8N228 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms