Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 AC092474.2-201ENST00000424288 719 ntBASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 AL513190.1-201ENST00000621254 727 ntBASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC65Q8IXS2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 AC068137.2-201ENST00000605408 478 ntBASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 PCDH8P1-201ENST00000428983 2773 ntBASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 AC011270.2-201ENST00000624293 2550 ntBASIC18.35■□□□□ 0.53
CCDC65Q8IXS2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 MTHFR-217ENST00000641820 1569 ntBASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms