Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 RNU1-129P-201ENST00000384064 167 ntBASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 VN2R19P-201ENST00000442399 1052 ntBASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 KRT126P-201ENST00000549467 1181 ntBASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 AP001005.1-201ENST00000571755 1248 ntBASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 U1.21-201ENST00000580816 167 ntBASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 AL031055.1-201ENST00000606362 631 ntBASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
CDKL3Q8IVW4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.02■□□□□ 0.31
CDKL3Q8IVW4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.02■□□□□ 0.31
CDKL3Q8IVW4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.02■□□□□ 0.31
CDKL3Q8IVW4 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL3Q8IVW4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.02■□□□□ 0.31
CDKL3Q8IVW4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDKL3Q8IVW4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.02■□□□□ 0.31
CDKL3Q8IVW4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 MRPL3P1-201ENST00000400109 1033 ntBASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 AC009947.1-201ENST00000444350 727 ntBASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 AL513480.1-201ENST00000451731 511 ntBASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 UNC93B6-202ENST00000528242 690 ntBASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 AL031432.2-201ENST00000566714 459 ntBASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 AL928711.1-201ENST00000570165 459 ntBASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 AC116407.3-201ENST00000623905 1129 ntBASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDKL3Q8IVW4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDKL3Q8IVW4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CDKL3Q8IVW4 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDKL3Q8IVW4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDKL3Q8IVW4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDKL3Q8IVW4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDKL3Q8IVW4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDKL3Q8IVW4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDKL3Q8IVW4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDKL3Q8IVW4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 HMGA1P7-201ENST00000406908 502 ntBASIC17■□□□□ 0.31
CDKL3Q8IVW4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDKL3Q8IVW4 CRYGEP-201ENST00000412192 528 ntBASIC17■□□□□ 0.31
CDKL3Q8IVW4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDKL3Q8IVW4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 AL662844.1-201ENST00000546340 181 ntBASIC17■□□□□ 0.31
CDKL3Q8IVW4 CD63-210ENST00000550776 870 ntTSL 5 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
CDKL3Q8IVW4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms