Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 ME2P1-201ENST00000426028 1970 ntBASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 LINC01711-201ENST00000598340 967 ntBASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC50Q8IVM0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 PTCHD3P3-201ENST00000403073 906 ntBASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 TSPY19P-201ENST00000418461 509 ntBASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 TSPY18P-201ENST00000441642 509 ntBASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 PAWRP1-201ENST00000451083 565 ntBASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 AC087163.2-201ENST00000457299 853 ntBASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 AC004706.3-202ENST00000621574 984 ntBASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 AL139011.1-202ENST00000642063 584 ntBASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 AC132872.4-202ENST00000622924 2756 ntBASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 AL671710.1-201ENST00000610245 2349 ntBASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 AC104640.1-201ENST00000562617 2109 ntBASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC50Q8IVM0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC50Q8IVM0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms