Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CROCCP3Q8IVE0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 LINC00552-201ENST00000625151 2579 ntBASIC15.04■□□□□ -0
CROCCP3Q8IVE0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 BEND3P1-201ENST00000421591 1944 ntBASIC15.04■□□□□ -0
CROCCP3Q8IVE0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 TUBB8P12-201ENST00000308911 1335 ntBASIC15.04■□□□□ -0
CROCCP3Q8IVE0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 TUBB7P-202ENST00000428444 1305 ntBASIC15.04■□□□□ -0
CROCCP3Q8IVE0 TUBB8P7-204ENST00000567960 1332 ntBASIC15.04■□□□□ -0
CROCCP3Q8IVE0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 TSPY12P-201ENST00000421279 868 ntBASIC15.04■□□□□ -0
CROCCP3Q8IVE0 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 AL512604.3-201ENST00000569583 964 ntBASIC15.04■□□□□ -0
CROCCP3Q8IVE0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 REXO1L10P-201ENST00000615707 1290 ntBASIC15.04■□□□□ -0
CROCCP3Q8IVE0 REXO1L12P-201ENST00000622156 912 ntBASIC15.04■□□□□ -0
CROCCP3Q8IVE0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CROCCP3Q8IVE0 AC112504.1-201ENST00000623415 1841 ntBASIC15.03■□□□□ -0
CROCCP3Q8IVE0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 AC087386.2-201ENST00000623212 4637 ntBASIC15.03■□□□□ -0
CROCCP3Q8IVE0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 AL355802.2-201ENST00000402069 882 ntBASIC15.03■□□□□ -0
CROCCP3Q8IVE0 AC007663.1-201ENST00000438948 1240 ntBASIC15.03■□□□□ -0
CROCCP3Q8IVE0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 NEK4P2-201ENST00000580004 1012 ntBASIC15.03■□□□□ -0
CROCCP3Q8IVE0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 AP001412.1-201ENST00000608405 714 ntBASIC15.03■□□□□ -0
CROCCP3Q8IVE0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 AC007686.3-201ENST00000619017 3487 ntBASIC15.03■□□□□ -0
CROCCP3Q8IVE0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CROCCP3Q8IVE0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms