Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 KRT126P-201ENST00000549467 1181 ntBASIC17.24■□□□□ 0.35
RFX6Q8HWS3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX6Q8HWS3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 MTHFR-217ENST00000641820 1569 ntBASIC17.23■□□□□ 0.35
RFX6Q8HWS3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 MRPL3P1-201ENST00000400109 1033 ntBASIC17.23■□□□□ 0.35
RFX6Q8HWS3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 FAM185BP-201ENST00000443595 716 ntBASIC17.23■□□□□ 0.35
RFX6Q8HWS3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 ACTL9-202ENST00000612068 1252 ntBASIC17.23■□□□□ 0.35
RFX6Q8HWS3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX6Q8HWS3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.22■□□□□ 0.35
RFX6Q8HWS3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX6Q8HWS3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX6Q8HWS3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX6Q8HWS3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX6Q8HWS3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX6Q8HWS3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX6Q8HWS3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX6Q8HWS3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RFX6Q8HWS3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX6Q8HWS3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX6Q8HWS3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX6Q8HWS3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.22■□□□□ 0.35
RFX6Q8HWS3 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.22■□□□□ 0.35
RFX6Q8HWS3 CXCL1P1-201ENST00000502804 216 ntBASIC17.22■□□□□ 0.35
RFX6Q8HWS3 AC093909.1-201ENST00000504731 1122 ntBASIC17.22■□□□□ 0.35
RFX6Q8HWS3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms