Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 AC006449.5-201ENST00000610658 2098 ntBASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 AC092902.6-201ENST00000641783 218 ntBASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RAB11FIP4Q86YS3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB11FIP4Q86YS3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
RAB11FIP4Q86YS3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RAB11FIP4Q86YS3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB11FIP4Q86YS3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB11FIP4Q86YS3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RAB11FIP4Q86YS3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 AC004832.2-201ENST00000426397 482 ntBASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 AC092865.5-201ENST00000545435 363 ntBASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 PCGF3-213ENST00000620529 1899 ntBASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB11FIP4Q86YS3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 MCCD1P2-201ENST00000423228 335 ntBASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 AC092474.2-201ENST00000424288 719 ntBASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 ME2P1-201ENST00000426028 1970 ntBASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB11FIP4Q86YS3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB11FIP4Q86YS3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms