Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 AC006449.6-201ENST00000612330 2296 ntBASIC15.32■□□□□ 0.04
VRK2Q86Y07 LINC01144-201ENST00000626198 1710 ntBASIC15.32■□□□□ 0.04
VRK2Q86Y07 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 MRPL3P1-201ENST00000400109 1033 ntBASIC15.32■□□□□ 0.04
VRK2Q86Y07 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 AC098831.1-202ENST00000438821 336 ntBASIC15.32■□□□□ 0.04
VRK2Q86Y07 FAM185BP-201ENST00000443595 716 ntBASIC15.32■□□□□ 0.04
VRK2Q86Y07 FAAHP1-202ENST00000446499 1238 ntBASIC15.32■□□□□ 0.04
VRK2Q86Y07 AC108751.1-201ENST00000490852 363 ntBASIC15.32■□□□□ 0.04
VRK2Q86Y07 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 PAUPAR-201ENST00000630360 2965 ntBASIC15.32■□□□□ 0.04
VRK2Q86Y07 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VRK2Q86Y07 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.32■□□□□ 0.04
VRK2Q86Y07 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.31■□□□□ 0.04
VRK2Q86Y07 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 CXCL1P1-201ENST00000502804 216 ntBASIC15.31■□□□□ 0.04
VRK2Q86Y07 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 AL160237.2-201ENST00000556165 472 ntBASIC15.31■□□□□ 0.04
VRK2Q86Y07 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 AC116407.3-201ENST00000623905 1129 ntBASIC15.31■□□□□ 0.04
VRK2Q86Y07 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.31■□□□□ 0.04
VRK2Q86Y07 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VRK2Q86Y07 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VRK2Q86Y07 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK2Q86Y07 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK2Q86Y07 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK2Q86Y07 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK2Q86Y07 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK2Q86Y07 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms