Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 AGER-214ENST00000538695 487 ntTSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 AP000812.2-201ENST00000538934 718 ntBASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 AC005052.1-201ENST00000625181 2492 ntBASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 AC006033.1-201ENST00000440505 426 ntBASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 IGHJ2P-201ENST00000454480 60 ntBASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 RPS24-214ENST00000613865 538 ntTSL 5 BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
VPS13BQ7Z7G8 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 AC092978.1-202ENST00000637590 1327 ntBASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 LINC02012-201ENST00000608206 1725 ntBASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 KRT8P12-202ENST00000472924 1397 ntBASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 RN7SL190P-201ENST00000582519 257 ntBASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 AC233724.13-201ENST00000598383 410 ntBASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 MAX-210ENST00000555419 765 ntTSL 5 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 MIR3615-201ENST00000581999 87 ntBASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 AL136982.4-201ENST00000437689 1740 ntBASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
VPS13BQ7Z7G8 AL391256.1-201ENST00000443260 1855 ntBASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 AC005229.1-201ENST00000392885 409 ntBASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 FOS-206ENST00000555347 1280 ntTSL 2 BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 COG4-212ENST00000564653 590 ntTSL 5 BASIC10.02□□□□□ -0.8
VPS13BQ7Z7G8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms