Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC11.05□□□□□ -0.64
SCXQ7RTU7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SCXQ7RTU7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 CRYGEP-201ENST00000412192 528 ntBASIC11.04□□□□□ -0.64
SCXQ7RTU7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 AC112482.1-201ENST00000492080 688 ntBASIC11.04□□□□□ -0.64
SCXQ7RTU7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 AC079781.4-201ENST00000641908 219 ntBASIC11.04□□□□□ -0.64
SCXQ7RTU7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 MST1L-201ENST00000442552 2185 ntBASIC11.04□□□□□ -0.64
SCXQ7RTU7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
SCXQ7RTU7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
SCXQ7RTU7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms