Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC62Q6P9F0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC62Q6P9F0 CROCCP1-201ENST00000426910 5675 ntBASIC18.53■□□□□ 0.56
CCDC62Q6P9F0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC62Q6P9F0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC62Q6P9F0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC62Q6P9F0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC62Q6P9F0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC62Q6P9F0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC62Q6P9F0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC62Q6P9F0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC62Q6P9F0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC62Q6P9F0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CCDC62Q6P9F0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC62Q6P9F0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 AC060834.1-201ENST00000443027 2032 ntBASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 AC009477.1-201ENST00000452936 217 ntBASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 AP002490.2-201ENST00000524791 560 ntBASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC62Q6P9F0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC62Q6P9F0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CCDC62Q6P9F0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC62Q6P9F0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.52■□□□□ 0.55
CCDC62Q6P9F0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.52■□□□□ 0.55
CCDC62Q6P9F0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC62Q6P9F0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.52■□□□□ 0.55
CCDC62Q6P9F0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
CCDC62Q6P9F0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.52■□□□□ 0.55
CCDC62Q6P9F0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.52■□□□□ 0.55
CCDC62Q6P9F0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CCDC62Q6P9F0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 RPL37AP1-201ENST00000412502 279 ntBASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 AC093724.1-201ENST00000448659 1027 ntBASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 AC009407.1-201ENST00000568958 598 ntBASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 AC105021.1-202ENST00000570572 669 ntBASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 TEX28P1-201ENST00000613479 1221 ntBASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 TEX28P2-201ENST00000617764 1221 ntBASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 OR6D1P-203ENST00000641209 4860 ntBASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC62Q6P9F0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC62Q6P9F0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms