Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LRRK2Q5S007 AL589702.1-201ENST00000641229 1509 ntBASIC14.13□□□□□ -0.15
LRRK2Q5S007 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRRK2Q5S007 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRRK2Q5S007 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRK2Q5S007 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRRK2Q5S007 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.12□□□□□ -0.15
LRRK2Q5S007 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRRK2Q5S007 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 AC009486.1-201ENST00000569860 813 ntBASIC14.12□□□□□ -0.15
LRRK2Q5S007 AC018635.2-201ENST00000608625 364 ntBASIC14.12□□□□□ -0.15
LRRK2Q5S007 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRK2Q5S007 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRK2Q5S007 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRK2Q5S007 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRK2Q5S007 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRK2Q5S007 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRRK2Q5S007 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRK2Q5S007 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRRK2Q5S007 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LRRK2Q5S007 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LRRK2Q5S007 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.12□□□□□ -0.15
LRRK2Q5S007 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 AC008267.1-201ENST00000474858 1069 ntBASIC14.11□□□□□ -0.15
LRRK2Q5S007 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.11□□□□□ -0.15
LRRK2Q5S007 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 AL096828.3-201ENST00000615354 462 ntBASIC14.11□□□□□ -0.15
LRRK2Q5S007 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 C2orf27AP3-201ENST00000434123 579 ntBASIC14.11□□□□□ -0.15
LRRK2Q5S007 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 AL354718.3-201ENST00000616414 581 ntBASIC14.11□□□□□ -0.15
LRRK2Q5S007 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 AC079336.7-201ENST00000623428 1078 ntBASIC14.11□□□□□ -0.15
LRRK2Q5S007 AC138951.2-201ENST00000623455 1161 ntBASIC14.11□□□□□ -0.15
LRRK2Q5S007 CR382287.1-201ENST00000623954 586 ntBASIC14.11□□□□□ -0.15
LRRK2Q5S007 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.11□□□□□ -0.15
LRRK2Q5S007 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LRRK2Q5S007 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRK2Q5S007 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LRRK2Q5S007 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRK2Q5S007 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 AP001063.1-201ENST00000568332 529 ntBASIC14.1□□□□□ -0.15
LRRK2Q5S007 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 AC091812.3-201ENST00000621362 345 ntBASIC14.1□□□□□ -0.15
LRRK2Q5S007 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LRRK2Q5S007 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRK2Q5S007 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LRRK2Q5S007 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms