Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.03□□□□□ -0.16
SSBP1Q04837 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SSBP1Q04837 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.03□□□□□ -0.16
SSBP1Q04837 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SSBP1Q04837 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.03□□□□□ -0.16
SSBP1Q04837 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SSBP1Q04837 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SSBP1Q04837 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.02□□□□□ -0.16
SSBP1Q04837 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.02□□□□□ -0.16
SSBP1Q04837 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.02□□□□□ -0.16
SSBP1Q04837 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
SSBP1Q04837 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.02□□□□□ -0.16
SSBP1Q04837 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.02□□□□□ -0.16
SSBP1Q04837 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SSBP1Q04837 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SSBP1Q04837 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 AL590787.1-201ENST00000568856 1315 ntBASIC14.02□□□□□ -0.17
SSBP1Q04837 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 SPDYE21P-201ENST00000413323 827 ntBASIC14.02□□□□□ -0.17
SSBP1Q04837 AC026396.1-201ENST00000419388 421 ntBASIC14.02□□□□□ -0.17
SSBP1Q04837 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.02□□□□□ -0.17
SSBP1Q04837 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 SLC25A3P1-201ENST00000443844 931 ntBASIC14.02□□□□□ -0.17
SSBP1Q04837 ATP5G1P1-201ENST00000448724 379 ntBASIC14.02□□□□□ -0.17
SSBP1Q04837 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.02□□□□□ -0.17
SSBP1Q04837 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.02□□□□□ -0.17
SSBP1Q04837 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
SSBP1Q04837 AC091167.2-201ENST00000579581 588 ntBASIC14.02□□□□□ -0.17
SSBP1Q04837 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.02□□□□□ -0.17
SSBP1Q04837 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.02□□□□□ -0.17
SSBP1Q04837 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.02□□□□□ -0.17
SSBP1Q04837 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SSBP1Q04837 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.02□□□□□ -0.17
SSBP1Q04837 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.02□□□□□ -0.17
SSBP1Q04837 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SSBP1Q04837 AC004817.3-201ENST00000602957 2129 ntBASIC14.02□□□□□ -0.17
SSBP1Q04837 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
SSBP1Q04837 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.02□□□□□ -0.17
SSBP1Q04837 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SSBP1Q04837 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
SSBP1Q04837 LINC01101-201ENST00000622953 1884 ntBASIC14.01□□□□□ -0.17
SSBP1Q04837 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.01□□□□□ -0.17
SSBP1Q04837 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SSBP1Q04837 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SSBP1Q04837 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 AL592424.1-201ENST00000563624 1536 ntBASIC14.01□□□□□ -0.17
SSBP1Q04837 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.01□□□□□ -0.17
SSBP1Q04837 PRAL-201ENST00000624952 3286 ntBASIC14.01□□□□□ -0.17
SSBP1Q04837 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
SSBP1Q04837 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SSBP1Q04837 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
SSBP1Q04837 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 YBX1P2-201ENST00000489612 999 ntBASIC14.01□□□□□ -0.17
SSBP1Q04837 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSBP1Q04837 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms