Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.3■□□□□ 0.04
SMIM11AP58511 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.3■□□□□ 0.04
SMIM11AP58511 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.3■□□□□ 0.04
SMIM11AP58511 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SMIM11AP58511 NKAPP1-205ENST00000585790 367 ntBASIC15.3■□□□□ 0.04
SMIM11AP58511 AP001269.4-201ENST00000609611 512 ntBASIC15.3■□□□□ 0.04
SMIM11AP58511 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM11AP58511 AC020765.3-201ENST00000613051 740 ntBASIC15.3■□□□□ 0.04
SMIM11AP58511 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SMIM11AP58511 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SMIM11AP58511 REXO1L3P-201ENST00000622202 1288 ntBASIC15.3■□□□□ 0.04
SMIM11AP58511 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.3■□□□□ 0.04
SMIM11AP58511 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
SMIM11AP58511 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM11AP58511 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM11AP58511 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM11AP58511 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM11AP58511 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM11AP58511 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM11AP58511 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMIM11AP58511 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.3■□□□□ 0.04
SMIM11AP58511 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SMIM11AP58511 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.3■□□□□ 0.04
SMIM11AP58511 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SMIM11AP58511 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM11AP58511 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SMIM11AP58511 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM11AP58511 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SMIM11AP58511 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SMIM11AP58511 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.29■□□□□ 0.04
SMIM11AP58511 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SMIM11AP58511 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM11AP58511 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.29■□□□□ 0.04
SMIM11AP58511 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 AL353732.1-201ENST00000569618 1459 ntBASIC15.29■□□□□ 0.04
SMIM11AP58511 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM11AP58511 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SMIM11AP58511 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SMIM11AP58511 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SMIM11AP58511 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.29■□□□□ 0.04
SMIM11AP58511 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.29■□□□□ 0.04
SMIM11AP58511 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.29■□□□□ 0.04
SMIM11AP58511 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.29■□□□□ 0.04
SMIM11AP58511 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.29■□□□□ 0.04
SMIM11AP58511 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 AC087388.1-201ENST00000571370 1112 ntBASIC15.29■□□□□ 0.04
SMIM11AP58511 AC069148.1-201ENST00000608741 768 ntBASIC15.29■□□□□ 0.04
SMIM11AP58511 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 AP000550.4-202ENST00000639755 178 ntBASIC15.29■□□□□ 0.04
SMIM11AP58511 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SMIM11AP58511 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SMIM11AP58511 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SMIM11AP58511 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMIM11AP58511 AC132872.4-202ENST00000622924 2756 ntBASIC15.29■□□□□ 0.04
SMIM11AP58511 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.29■□□□□ 0.04
SMIM11AP58511 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11AP58511 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11AP58511 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SMIM11AP58511 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.28■□□□□ 0.04
SMIM11AP58511 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11AP58511 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.28■□□□□ 0.04
SMIM11AP58511 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11AP58511 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11AP58511 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SMIM11AP58511 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM11AP58511 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
SMIM11AP58511 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11AP58511 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11AP58511 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11AP58511 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.28■□□□□ 0.04
SMIM11AP58511 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.28■□□□□ 0.04
SMIM11AP58511 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11AP58511 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.28■□□□□ 0.04
SMIM11AP58511 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11AP58511 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.28■□□□□ 0.04
SMIM11AP58511 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.28■□□□□ 0.04
SMIM11AP58511 CYP2A7P1-201ENST00000595391 815 ntBASIC15.28■□□□□ 0.04
SMIM11AP58511 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11AP58511 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11AP58511 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.28■□□□□ 0.04
SMIM11AP58511 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMIM11AP58511 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.28■□□□□ 0.04
SMIM11AP58511 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms