Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AP000347.1-202ENST00000435868 847 ntBASIC16.71■□□□□ 0.27
WNT3AP56704 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.71■□□□□ 0.27
WNT3AP56704 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
WNT3AP56704 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.71■□□□□ 0.27
WNT3AP56704 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
WNT3AP56704 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.71■□□□□ 0.27
WNT3AP56704 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
WNT3AP56704 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
WNT3AP56704 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
WNT3AP56704 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
WNT3AP56704 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
WNT3AP56704 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
WNT3AP56704 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
WNT3AP56704 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
WNT3AP56704 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.71■□□□□ 0.27
WNT3AP56704 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
WNT3AP56704 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.71■□□□□ 0.27
WNT3AP56704 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
WNT3AP56704 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
WNT3AP56704 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.7■□□□□ 0.26
WNT3AP56704 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.7■□□□□ 0.26
WNT3AP56704 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
WNT3AP56704 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.7■□□□□ 0.26
WNT3AP56704 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.7■□□□□ 0.26
WNT3AP56704 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.7■□□□□ 0.26
WNT3AP56704 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
WNT3AP56704 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.7■□□□□ 0.26
WNT3AP56704 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.7■□□□□ 0.26
WNT3AP56704 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.7■□□□□ 0.26
WNT3AP56704 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
WNT3AP56704 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
WNT3AP56704 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
WNT3AP56704 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.7■□□□□ 0.26
WNT3AP56704 AC016027.1-202ENST00000607927 1699 ntBASIC16.7■□□□□ 0.26
WNT3AP56704 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.7■□□□□ 0.26
WNT3AP56704 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
WNT3AP56704 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.7■□□□□ 0.26
WNT3AP56704 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.7■□□□□ 0.26
WNT3AP56704 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.7■□□□□ 0.26
WNT3AP56704 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.7■□□□□ 0.26
WNT3AP56704 AL671883.3-201ENST00000603274 991 ntBASIC16.7■□□□□ 0.26
WNT3AP56704 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.7■□□□□ 0.26
WNT3AP56704 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.7■□□□□ 0.26
WNT3AP56704 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
WNT3AP56704 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
WNT3AP56704 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
WNT3AP56704 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
WNT3AP56704 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.7■□□□□ 0.26
WNT3AP56704 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.7■□□□□ 0.26
WNT3AP56704 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.7■□□□□ 0.26
WNT3AP56704 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
WNT3AP56704 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
WNT3AP56704 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.69■□□□□ 0.26
WNT3AP56704 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
WNT3AP56704 MTHFR-217ENST00000641820 1569 ntBASIC16.69■□□□□ 0.26
WNT3AP56704 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
WNT3AP56704 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
WNT3AP56704 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
WNT3AP56704 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
WNT3AP56704 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
WNT3AP56704 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.69■□□□□ 0.26
WNT3AP56704 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
WNT3AP56704 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.69■□□□□ 0.26
WNT3AP56704 AC002056.1-201ENST00000395613 760 ntBASIC16.69■□□□□ 0.26
WNT3AP56704 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.69■□□□□ 0.26
WNT3AP56704 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.69■□□□□ 0.26
WNT3AP56704 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.69■□□□□ 0.26
WNT3AP56704 PGAM5P1-201ENST00000518923 814 ntBASIC16.69■□□□□ 0.26
WNT3AP56704 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
WNT3AP56704 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.69■□□□□ 0.26
WNT3AP56704 AC040169.1-201ENST00000565382 521 ntBASIC16.69■□□□□ 0.26
WNT3AP56704 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
WNT3AP56704 AL078644.1-201ENST00000609881 752 ntBASIC16.69■□□□□ 0.26
WNT3AP56704 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.69■□□□□ 0.26
WNT3AP56704 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.69■□□□□ 0.26
WNT3AP56704 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
WNT3AP56704 AC005622.1-201ENST00000636801 1703 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms